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R Markdown to other document formats

December 26, 2012 | Will

Perhaps you have a file written in Markdown with embedded R of the kind that RStudio makes so nice and easy but you’d like a range of output formats to keep your collaborators happy.  Say latex, pdf, html and MS Word.  Here’s what you might do I shall ... [Read more...]

Video Tip: Convert Gene IDs with Biomart

March 14, 2012 | Stephen Turner

I get asked frequently how to convert from one gene identifier to another. This can be tricky, especially when relying on gene symbols, as Will pointed out in a previous post a few years ago. There are several tools that can do this, including DAVID an... [Read more...]

What’s there to like about R?

October 12, 2011 | yang

Update 10/11/2011: There’s a good discussion on RedditUpdate 10/12/2011: Note manipulate package and highlight data.table packageThe R statistical computing platform is a rising star that’s been gaining popularity and attention, but it gets no respect in the hood. It’s telling that a popular guide to R is called ... [Read more...]

More Thoughts on US Death Spiral

July 13, 2011 | klr

What troubles me most about today’s environment is the persistent belief that crisis large or small results in a US dollar rally and lower Treasury rates. However, what happens if the US dollar and US Treasury rates are the source of the crisis? Then...
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Plotting git statistics

July 13, 2011 | Dzidorius Martinaitis

Here’s a funny story – friend of my, avid gamer at that time, was going downhill on a bicycle when wonderful idea flashed his mind: I need to save the current status… Just in case if I crash, I will start again from the top of the hill. If you ... [Read more...]

Measuring the EIU Democracy Index (with Polity IV)

July 12, 2011 | Tony

Yet again, I have conjured up an (academically) unusual dataset on democracy! This time it’s the Economist Intelligence Unit’s Democracy Index, a weird little gem.  The dataset is the basis for a paper the Economist publishes every two years.  Because of this biannuality, there is data estimating the “... [Read more...]

A surprising(?) prediction about the S&P 500

July 12, 2011 | David Smith

Financial analyst Greg Troccoli was a lone wolf when he predicted in July 2010 that “If the [S&P500] Index held at or above our proprietary support zone (1000.00- 950.00 region), it would eventually trade to a new historical high within 12 - 18 months (July- December 2011 timeframe)”. For reference, the S&P500 all-time ... [Read more...]

About Fig. 4 of Fagundes et al. (2007)

July 12, 2011 | xi'an

Yesterday, we had a meeting of our EMILE network on statistics for population genetics (in Montpellier) and we were discussing our respective recent advances in ABC model choice. One of our colleagues mentioned the constant request (from referees) to include the post-ABC processing devised by Fagundes et al. in their 2007 ... [Read more...]

What is your favorite R feature?

July 12, 2011 | Markus (cloudnumbers.com)

R (www.r-project.org) is a free and strongly functional language and environment for statistical computing. You can explore data sets, make graphical displays of data, run statistical simulations and many more. If you never used R you should give it a try! R beginners: There are many courses, slides ... [Read more...]

Drawdown Control Can Also Determine Ending Wealth

July 11, 2011 | klr

As an extension to yesterday’s post Just Arriving is Not Enough, I wanted to show how minimizing drawdown is a much better technique to help control comfort and potentially increase ending wealth.  CHTTX was one of the best performers of the fou...
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In case you missed it: June Roundup

July 11, 2011 | David Smith

In case you missed them, here are some articles from June of particular interest to R users. Highlights of presentations from the R/Finance 2011 conference. Trulia uses R and statistical models to map local crime. Resources for data mining with R. K-means clustering on large data sets with the RevoScaleR ... [Read more...]

The foundations of Statistics: a simulation-based approach

July 11, 2011 | xi'an

“We have seen that a perfect correlation is perfectly linear, so an imperfect correlation will be `imperfectly linear’.” page 128 This book has been written by two linguists, Shravan Vasishth and Michael Broe, in order to teach statistics “in  areas that are traditionally not mathematically demanding” at a deeper level than ... [Read more...]

Tamino’s Method: Regional Temperatures

July 11, 2011 | Steven Mosher

Tamino over at  Open Mind has a new post detailing his approach for calculating temperature averages. See his post here. His method is based on the Berkeley method as he notes and he uses it primarily for calculating regional or local temperature averages. Read his post for the math details ... [Read more...]

Testing an S&P 500 prediction

July 10, 2011 | Pat

If a particular prediction comes true, how surprised should we be? The prediction The page that sparked my curiosity tells of a prediction made a year ago that the S&P 500 would beat its historic high by the end of 2011.  It says that at the point the prediction was made, ... [Read more...]

Now I’m R-Blogging

July 10, 2011 | Martin Scharm

Today a lot of great mails arrived at my inbox. In one of them I was reading I’ve just added your feed to the site. Where did this mail come from? The sender of the email was Tal Galili. He is a researcher in BioStatistics at the Tel Aviv ... [Read more...]
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