Articles by xi'an

The synoptic problem and statistics [book review]

March 19, 2015 | xi'an

A book that came to me for review in CHANCE and that came completely unannounced is Andris Abakuks’ The Synoptic Problem and Statistics.  “Unannounced” in that I had not heard so far of the synoptic problem. This problem is one of ordering and connecting the gospels in the New Testament, ...
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amazing Gibbs sampler

February 18, 2015 | xi'an

When playing with Peter Rossi’s bayesm R package during a visit of Jean-Michel Marin to Paris, last week, we came up with the above Gibbs outcome. The setting is a Gaussian mixture model with three components in dimension 5 and the prior distributions are standard conjugate. In this case, with 500 ... [Read more...]

MissData 2015 in Rennes [June 18-19]

February 9, 2015 | xi'an

This (early) summer, a conference on missing data will be organised in Rennes, Brittany, with the support of the French Statistical Society [SFDS]. (Check the website if interested, Rennes is a mere two hours from Paris by fast train.)Filed under: R, ...
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the density that did not exist…

January 26, 2015 | xi'an

On Cross Validated, I had a rather extended discussion with a user about a probability density as I thought it could be decomposed in two manageable conditionals and simulated by Gibbs sampling. The first component led to a Gumbel like density wirh y being restricted to either (0,1) or (1,∞) depending on β. ...
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Sequential Monte Carlo 2015 workshop

January 22, 2015 | xi'an

An announcement for the SMC 2015 workshop: Sequential Monte Carlo methods (also known as particle filters) have revolutionized the on-line and off-line analysis of data in fields as diverse as target tracking, computer vision, financial modelling, brain imagery, or population ecology. Their popularity stems from the fact that they have made ...
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simulation by inverse cdf

January 13, 2015 | xi'an

Another Cross Validated forum question that led me to an interesting (?) reconsideration of certitudes! When simulating from a normal distribution, is Box-Muller algorithm better or worse than using the inverse cdf transform? My first reaction was to state that Box-Muller was exact while the inverse cdf relied on the coding ...
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top posts for 2014

December 29, 2014 | xi'an

Here are the most popular entries for 2014: 17 equations that changed the World (#2) 995 Le Monde puzzle [website] 992 “simply start over and build something better” 991 accelerating MCMC via parallel predictive prefetching 990 Bayesian p-values 960 posterior predictive p-values 849 Bayesian Data Analysis [BDA3] 846 Bayesian programming [book review] 834 Feller’s shoes […] [Read more...]

amazonish thanks (& repeated warning)

December 8, 2014 | xi'an

As in previous years, at about this time, I want to (re)warn unaware ‘Og readers that all links to Amazon.com and more rarely to Amazon.fr found on this blog are actually susceptible to earn me an advertising percentage if a purchase is made by the reader in ... [Read more...]

the Grumble distribution and an ODE

December 2, 2014 | xi'an

As ‘Og’s readers may have noticed, I paid some recent visits to Cross Validated (although I find this too addictive to be sustainable on a long term basis!, and as already reported a few years ago frustrating at several levels from questions asked without any preliminary personal effort, to ... [Read more...]

Le Monde puzzle [#887quater]

November 27, 2014 | xi'an

And yet another resolution of this combinatorics Le Monde mathematical puzzle: that puzzle puzzled many more people than usual! This solution is by Marco F, using a travelling salesman representation and existing TSP software. N is a golden number if the sequence {1,2,…,N} can be reordered so that the sum ...
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an ABC experiment

November 23, 2014 | xi'an

  In a cross-validated forum exchange, I used the code below to illustrate the working of an ABC algorithm: Hence I used the median and the mad as my summary statistics. And the outcome is rather surprising, for two reasons: the first one is that the posterior on the mean μ is ...
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Le Monde puzzle [#887bis]

November 15, 2014 | xi'an

As mentioned in the previous post, an alternative consists in filling the permutation of {1,…,N} by adding squares left and right until the permutation is complete or no solution is available. While this sounds like the dual of the initial solution, it brings a considerable increase in computing time, as ...
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Le Monde puzzle [#887]

November 14, 2014 | xi'an

A simple combinatorics Le Monde mathematical puzzle: N is a golden number if the sequence {1,2,…,N} can be reordered so that the sum of any consecutive pair is a perfect square. What are the golden numbers between 1 and 25? Indeed, from an R programming point of view, all I have to ...
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Rasmus’ socks fit perfectly!

November 10, 2014 | xi'an

Following the previous post on Rasmus’ socks, I took the opportunity of a survey on ABC I am currently completing to compare the outcome of his R code with my analytical derivation. After one quick correction [by Rasmus] of a wrong representation of the Negative Binomial mean-variance parametrisation [by me], ... [Read more...]

reliable ABC model choice via random forests

October 28, 2014 | xi'an

After a somewhat prolonged labour (!), we have at last completed our paper on ABC model choice with random forests and submitted it to PNAS for possible publication. While the paper is entirely methodological, the primary domain of application of ABC model choice methods remains population genetics and the diffusion of ...
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a bootstrap likelihood approach to Bayesian computation

October 15, 2014 | xi'an

This paper by Weixuan Zhu, Juan Miguel Marín [from Carlos III in Madrid, not to be confused with Jean-Michel Marin, from Montpellier!], and Fabrizio Leisen proposes an alternative to our 2013 PNAS paper with Kerrie Mengersen and Pierre Pudlo on empirical likelihood ABC, or BCel. The alternative is based on ...
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randomness in coin tosses and last digits of prime numbers

October 7, 2014 | xi'an

A rather intriguing note that was arXived last week: it is essentially one page long and it compares the power law of the frequency range for the Bernoulli experiment with the power law of the frequency range for the distribution of the last digits of the first 10,000 prime numbers to ... [Read more...]

The winds of Winter [Bayesian prediction]

October 6, 2014 | xi'an

A surprising entry on arXiv this morning: Richard Vale (from Christchurch, NZ) has posted a paper about the characters appearing in the yet hypothetical next volume of George R.R. Martin’s Song of ice and fire series, The winds of Winter [not even put for pre-sale on amazon!]. Using ... [Read more...]
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