How to assess landscape connectivity with spatial capture-recapture models? @oSCR_package to the rescue ! Some code to reproduce results from a great paper by Dana Morin @Fuller_Lab @andyroyle_pwrc & @chrissuthy Post: https://t.co/FVwBzMnqA9Code: h... [Read more...]

📢👋 Together with @SarahCubaynes & @abesnardEPHE we will give a 2-day introductory workshop June 1-2 on quantitative methods for population dynamics in R #rstats Join us 🥳 It's online and free of charge 😉 You just need to register via https://t.co/otguiSMTY0Please RT 😇 pic.twitter.com/6ghDHE92SJ— Olivier Gimenez 🖖🦦 (@oaggimenez) ... [Read more...]

Ey! VIBASS 6 is announced online now https://t.co/VS8cLR8ocK🗓️ July 10-14 2023🚩Faculty of Mathematics @FMatemaUV_EG, Valencia, Spain Be aware that the registration would start really really soon and we just have few spots. Don't miss it. pic.twitter.com/5M61dbuxuF— VIBASS 6 (@vibass7) January 13, 2023 [Read more...]

🔧🚧 Intro on data wrangling w/ R 📦 dplyr - import data, pipe, pivot, join, filter, count, work w/ columns, dates, char, factors, etc #tidyverse▶️ https://t.co/Vs2TbYhbBj ◀️w/ practicals https://t.co/9ktKPp9wfW & solutions https://t.co/YPwibL2w31 Car... [Read more...]

😇 I updated the slides of my introduction to #GIS and #mapping in #rstats using the #sf package and 🐻 🗺️ in the #pyrenees 🏔️ 🧑‍🏫 Slides: https://t.co/mO4Dg8l1H5🧑‍💻 Code: https://t.co/X8fDKcrbFR#rspatial #spatial #ggplot2 #tidyverse #dataviz pic.twitter... [Read more...]

Happy to share lecture slides & R codes of an earlier version of the workshop 👇 we ran back in 2014 🤯 w JD Lebreton & @KoonsLab ➡️ https://t.co/XdcCQ560Pz #RStats For video 📽️📺, check out our workshop on pop dynamics https://t.co/jlTE4iF5zk w @... [Read more...]

[Read more...]

📢🥳 With @MaudQueroue and @ValentinLauret we gave a short introduction to nimble @R_nimble nimble is a #rstats 📦 to fit models in the Bayesian framework w/ MCMC, it's also a programming environment for using/coding fns/distns/samplers➡️ Check out https://t.co/MuUjGc4U8i pic.twitter.com/RBtu07v874— ... [Read more...]

A pleasure to work w/ #ComputoJournal @Computo85445972 for our paper on trade-offs bw #DeepLearning for species id & inference on predator-prey co-occurrence, which comes w/ a reproducible R workflow 😇https://t.co/Tgo6OJs7r0#OpenAccess #Reproducibl... [Read more...]

[Read more...]

I have a draft chapter on Bayes stats and MCMC at https://oliviergimenez.github.io/banana-book/crashcourse.html I’d love your feedback about what is confusing and what is missing ? #rstats [Read more...]

So, I’m writing a book ? It''’s called “Bayesian analysis of capture-recapture data with hidden Markov models - Theory and case studies in R”. So, I'm writing a book ? It's called 'Bayesian analysis of capture-recapture data w hidden Markov models - Theory and case studies in R'. Online version ... [Read more...]

[Read more...]

[Read more...]

Workshop to come on reproducible science in our lab. ?‍??♻️ Planning a 1-day workshop on reproducible science for our lab @cefemontpellier. We'll use R and RStudio, Git, GitHub, R Markdown, tidyverse and sf ?Material here https://t.co/QApKQsl1FU #rstats #ReproducibleScience @twitthair1 pix by @scriberian pic.twitter.com/LFBwZmelit— Olivier ... [Read more...]

Gathered some code on occupancy, capture-recapture & epidemiological models, social networks, spatial stuff, textual analyses, reproducible science, etc… ?‍??‍? In hope it's useful, I gathered random pieces of code I wrote on occupancy, capture-recapture & epidemiological models, social networks, spatial stuff, textual analyses, #DeepLearning and the #tidyverse ➡️ https://t.co/T1PlbmDLZO I ... [Read more...]

Trained in mathematics and statistics in particular, I have developed a bottomless taste for questions in statistical ecology. I often resort to state-space models, and hidden Markov models (e.g., here and here) in particular, to develop statistical me... [Read more...]

Interactive data visualisation of bias in occupancy models w/ flexdashboard. Interactive #dataviz of bias in occupancy models w/ #flexdashboard (aka #shinyapps for the rest of us) https://t.co/fkYiHfAaEU #rstats @rstudio #unmarked https://t.co/KKGTPE8e... [Read more...]