Gradient-Boosting anything (alert: high performance): Part4, Time series forecasting

[This article was first published on T. Moudiki's Webpage - R, and kindly contributed to R-bloggers]. (You can report issue about the content on this page here)
Want to share your content on R-bloggers? click here if you have a blog, or here if you don't.

A few weeks ago, I introduced a model-agnostic gradient boosting (XGBoost, LightGBM, CatBoost-like) procedure for supervised regression and classification, that can use any base learner (available in R and Python package mlsauce). You can find the previous posts here:

LightGBM is widely used in the context of time series forecasting (see e.g for M5 forecasting competition and VN1 competition), and is based on decision trees. However, it’s possible to use many other base learners, such as ridge regression, kernel ridge regression, etc. In this post, I will show how to use mlsauce version 0.24.0 for time series forecasting, with any base learner.

1 – Hold-out set cross-validation

Here, Generic Gradient Boosting is compared to popular models such as VAR and VECM (without hyperparameter tuning), on the macrodata dataset from the statsmodels package. The dataset is split into a training set (90% of the data) and a testing set (10% of the data), and model performance is evaluated using Root Mean Squared Error (RMSE) and Winkler score (uncertainty quantification). Uncertainty quantification uses conformal prediction and numerical simulation, as described in my paper and more details can be found in these slides.

import mlsauce as ms 
import numpy as np
import pandas as pd
import statsmodels.api as sm

try: 
    from statsmodels.tsa.base.datetools import dates_from_str
except ImportError:
    ModuleNotFoundError

# some example data
mdata = sm.datasets.macrodata.load_pandas().data
# prepare the dates index
dates = mdata[['year', 'quarter']].astype(int).astype(str)
quarterly = dates["year"] + "Q" + dates["quarter"]
quarterly = dates_from_str(quarterly)
mdata = mdata[['realgovt', 'tbilrate', 'cpi']]
mdata.index = pd.DatetimeIndex(quarterly)
data = np.log(mdata).diff().dropna()

n = data.shape[0]
max_idx_train = np.floor(n*0.9)
training_index = np.arange(0, max_idx_train)
testing_index = np.arange(max_idx_train, n)
df_train = data.iloc[training_index,:]
df_test = data.iloc[testing_index,:]


regr_mts = ms.LazyBoostingMTS(verbose=0, ignore_warnings=True, 
                      lags = 20, n_hidden_features=7, n_clusters=2,
                      type_pi="scp2-block-bootstrap", 
                      #kernel="gaussian",
                      replications=250, 
                      show_progress=False, preprocess=False, 
                      sort_by="WINKLERSCORE",)
models = regr_mts.fit(df_train, df_test)

print(models[["RMSE", "WINKLERSCORE", "Time Taken"]].iloc[0:25,:])

  0%|          | 0/30 [00:00<?, ?it/s]100%|██████████| 30/30 [00:13<00:00,  2.20it/s]

                                                 RMSE  WINKLERSCORE  \
Model                                                                 
MTS(GenericBooster(RidgeCV))                     0.32          1.71   
MTS(GenericBooster(PassiveAggressiveRegressor))  0.34          1.78   
MTS(GenericBooster(SGDRegressor))                0.32          1.87   
MTS(GenericBooster(Ridge))                       0.35          1.93   
MTS(GenericBooster(HuberRegressor))              0.37          1.95   
MTS(GenericBooster(ElasticNet))                  0.33          1.96   
MTS(GenericBooster(Lasso))                       0.33          1.96   
MTS(GenericBooster(DummyRegressor))              0.33          1.96   
MTS(GenericBooster(LassoLars))                   0.33          1.96   
MTS(GenericBooster(DecisionTreeRegressor))       0.33          1.97   
MTS(GenericBooster(QuantileRegressor))           0.33          1.98   
MTS(GenericBooster(LassoLarsIC))                 0.33          1.99   
MTS(GenericBooster(TweedieRegressor))            0.33          2.01   
MTS(GenericBooster(BayesianRidge))               0.33          2.01   
MTS(GenericBooster(LassoCV))                     0.33          2.02   
MTS(GenericBooster(LassoLarsCV))                 0.33          2.02   
MTS(GenericBooster(LarsCV))                      0.33          2.02   
MTS(GenericBooster(ElasticNetCV))                0.33          2.02   
MTS(GenericBooster(KNeighborsRegressor))         0.33          2.03   
MTS(GenericBooster(SVR))                         0.34          2.07   
MTS(GenericBooster(ExtraTreeRegressor))          0.33          2.19   
VAR                                              0.33          2.21   
VECM                                             0.34          2.39   
MTS(GenericBooster(LinearSVR))                   0.45          3.03   
MTS(GenericBooster(TransformedTargetRegressor))  0.49          3.04   

                                                 Time Taken  
Model                                                        
MTS(GenericBooster(RidgeCV))                           0.13  
MTS(GenericBooster(PassiveAggressiveRegressor))        0.29  
MTS(GenericBooster(SGDRegressor))                      0.09  
MTS(GenericBooster(Ridge))                             0.09  
MTS(GenericBooster(HuberRegressor))                    0.18  
MTS(GenericBooster(ElasticNet))                        0.09  
MTS(GenericBooster(Lasso))                             0.09  
MTS(GenericBooster(DummyRegressor))                    0.08  
MTS(GenericBooster(LassoLars))                         0.09  
MTS(GenericBooster(DecisionTreeRegressor))             0.11  
MTS(GenericBooster(QuantileRegressor))                 0.15  
MTS(GenericBooster(LassoLarsIC))                       0.30  
MTS(GenericBooster(TweedieRegressor))                  0.09  
MTS(GenericBooster(BayesianRidge))                     0.14  
MTS(GenericBooster(LassoCV))                           5.01  
MTS(GenericBooster(LassoLarsCV))                       0.54  
MTS(GenericBooster(LarsCV))                            0.46  
MTS(GenericBooster(ElasticNetCV))                      4.74  
MTS(GenericBooster(KNeighborsRegressor))               0.10  
MTS(GenericBooster(SVR))                               0.09  
MTS(GenericBooster(ExtraTreeRegressor))                0.10  
VAR                                                    0.01  
VECM                                                   0.01  
MTS(GenericBooster(LinearSVR))                         0.16  
MTS(GenericBooster(TransformedTargetRegressor))        0.13  

2 - Individual examples

Here, I will show how to use mlsauce for time series forecasting, with Ridge regression and Kernel Ridge regression as base learners. 250 conformal predictive simulations are performed, and the prediction is made for the next 20 periods.

import nnetsauce as ns

regr_ridge = ms.GenericBoostingRegressor(ms.RidgeRegressor(reg_lambda=1e3))
regr_krr = ms.GenericBoostingRegressor(ms.KRLSRegressor())

regr_mts = ns.MTS(regr_ridge, lags=20, replications=250,
                  type_pi="scp2-block-bootstrap")
regr_mts.fit(df_train)
regr_mts.predict(h=20)
regr_mts.plot('tbilrate')

100%|██████████| 46/46 [00:00<00:00, 1612.53it/s]
100%|██████████| 46/46 [00:00<00:00, 1678.79it/s]
100%|██████████| 46/46 [00:00<00:00, 1663.07it/s]
100%|██████████| 46/46 [00:00<00:00, 1298.61it/s]
100%|██████████| 46/46 [00:00<00:00, 1410.21it/s]
100%|██████████| 46/46 [00:00<00:00, 1676.63it/s]
100%|██████████| 3/3 [00:00<00:00, 13.82it/s]

xxx

regr_mts = ns.MTS(regr_krr, lags=20, replications=250,
                  type_pi="scp2-block-bootstrap")
regr_mts.fit(df_train)
regr_mts.predict(h=20)
regr_mts.plot('tbilrate')

100%|██████████| 34/34 [00:01<00:00, 19.22it/s]
100%|██████████| 34/34 [00:01<00:00, 18.17it/s]
100%|██████████| 34/34 [00:01<00:00, 19.39it/s]
100%|██████████| 34/34 [00:01<00:00, 19.90it/s]
100%|██████████| 34/34 [00:01<00:00, 19.76it/s]
100%|██████████| 34/34 [00:01<00:00, 17.15it/s]
100%|██████████| 3/3 [00:14<00:00,  4.76s/it]

xxx

To leave a comment for the author, please follow the link and comment on their blog: T. Moudiki's Webpage - R.

R-bloggers.com offers daily e-mail updates about R news and tutorials about learning R and many other topics. Click here if you're looking to post or find an R/data-science job.
Want to share your content on R-bloggers? click here if you have a blog, or here if you don't.

Never miss an update!
Subscribe to R-bloggers to receive
e-mails with the latest R posts.
(You will not see this message again.)

Click here to close (This popup will not appear again)