Want to share your content on R-bloggers? click here if you have a blog, or here if you don't.
The Mandelbrot Set is possibly one of the most visually appealing mathematical visualizations. The set is defined as the set of complex numbers $c$ for which the function $f_c(z) = z^2 + c$ remains bounded when iterated – i.e. the sequence $f_c(z), f_c(f_c(z)),f_c(f_c(f_c(…)))$ remains bounded below some fixed absolute threshold.
The basic method to generate a simple Mandelbrot set is fairly simple:
- Choose the values of $c$ to put in the iteration $z\rightarrow z^2+c$;
- Iteratively apply the mapping for each value of $c$ and test if the updated value is now $\geq \epsilon$ where $\epsilon$ is some fixed absolute threshold;
- Update our output grid to reflect the intensity at point $c$ – this can be a simple 1/0 to indicate that the iteration has become unbounded (or ‘escaped’) or it can be a value reflecting how many iterations it took before the value was determined to escape (or not)
R has a ‘native’ representation for complex numbers but for this example we will just use a 2-element vector as a complex number representation, each element being the real and imaginary components respectively.
The iterative step at each point to update the current value of $z \rightarrow z^2+c$ is computed as follows – if $z$ is assumed to be a complex number of the form $x+yi$:
$$(x+yi)(x+yi) = x^2-y^2+2xyi$$
So $Re(z)\rightarrow x^2-y^2+Re(c) $ and $Im(z) \rightarrow 2xy+Im(c)$
Here is some simple R code to illustrate:
# Subset of x-y plane x <- c(-2,1) y <- c(-1.5, 1.5) # Number of points in each dimension nx <- 500 ny <- 500 xgrid <- seq(x[1],x[2], length.out = nx) ygrid <- seq(y[1],y[2], length.out = ny) mand <- function(xgrid,ygrid,frac) { i <- j <- it <- 1 z <- c <- zprev <- c(0,0) TOL <- 4 # Escape value N <- 50 # Number of iterations to test for escape # The output fractal trace frac <- matrix(nrow=nx, ncol=ny, byrow=TRUE) for (i in seq_along(xgrid)) { for (j in seq_along(ygrid)) { c <- c(xgrid[i],ygrid[j]) z <- c(0,0) for (k in 1:N) { it <- k zprev <- z # If zprev is a complex number x + yi # Then we update z as follows: # Re(z) <- (x^2-y^2) + Re(c) z[1] <- zprev[1]*zprev[1]-zprev[2]*zprev[2]+c[1] # Im(z) <- 2*z*y + Im(c) z[2] <- 2*zprev[1]*zprev[2]+c[2] if ((z[1]*z[1] + z[2]*z[2])>TOL) { break } } frac[i,j] <- it } } return(list(x=xgrid,y=ygrid,z=frac)) }
To call the function and plot the output:
m <- mand(xgrid,ygrid,frac) image(m, col=gray.colors(50))
Which should produce an image like the following:
Changing the $x$ and $y$ grid coordinates enables you too zoom in to various areas on the fractal e.g. changing the x/y grid to:
x <- c(-2,-0.75) y <- c(-0.5, 0.5)
Results in the image below
The main drawback of iterative plain R code like this is that it is slow – however this could be speeded up using a native interface e.g. Rcpp and computing the iterative process in C/C++ code, where some of the copying overhead may be avoided.
R-bloggers.com offers daily e-mail updates about R news and tutorials about learning R and many other topics. Click here if you're looking to post or find an R/data-science job.
Want to share your content on R-bloggers? click here if you have a blog, or here if you don't.