Manipulate Biological Data Using Biostrings Package Exercises (Part 1)
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Bioinformatics is an amalgamation Biology and Computer science.Biological Data is manipulated using Computers and Computer software’s in Bioinformatics. Biological Data includes DNA; RNA & Protiens. DNA & RNA is made of Nucleotides which are our genetic material in which we are coded.Our Structure and Functions are done by protein, which are build of Amino acids
In the exercises below we cover how we can Manipulate Biological Data using Biostrings package in Bioconductor.
Install Packages
Biostrings
Answers to the exercises are available here.
If you obtained a different (correct) answer than those listed on the solutions page, please feel free to post your answer as a comment on that page.
Exercise 1
Print out the standard Genetic Code table using Biostrings Package
Exercise 2
Print the first codon in the standard genetic code
Exercise 3
Print out the Standard RNA Genetic Code table using Biostrings package
Exercise 4
Print out the Standard RNA Genetic Code of Stop codon using Biostrings package
Exercise 5
Print out the standard Amino acid codon table using Biostrings
- import data into R in several ways while also beeing able to identify a suitable import tool
- use SQL code within R
- And much more
Exercise 6
Print the code of the start codon from the standard genetic code
Exercise 7
Print the three letter code of Amino acid Methionine using Biostrings
Exercise 8
Create a DNA string and print the length and dinucleotide frequency of the string
Exercise 9
Create RNA string and print the length and dinucleotide frequency of the string
Exercise 10
Create a Protein string and print the length of the protein
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