Using external data from within another package
[This article was first published on r – log Fold Change, and kindly contributed to R-bloggers]. (You can report issue about the content on this page here)
Want to share your content on R-bloggers? click here if you have a blog, or here if you don't.
Want to share your content on R-bloggers? click here if you have a blog, or here if you don't.
If you make the error which I did, you will try to use the data (say, “pckgdata”) from another package (say, “pckg”) naively like this:
someFunc <- function() { data(pckgdata) foo <- pckgdata$whatever }
This will result in an error:
someFunc: no visible binding for global variable ‘pckgdata’ someFunc : <anonymous>: no visible binding for global variable ‘pckgdata’ Undefined global functions or variables: pckgdata
Here is the solution (thanks to the comments from stackexchange:
.myenv <- new.env(parent=emptyenv()) someFunc <- function() { data("pckgdata", package="pckg", envir=".myenv") foo <- .myenv$pckgdata$whatever }
To leave a comment for the author, please follow the link and comment on their blog: r – log Fold Change.
R-bloggers.com offers daily e-mail updates about R news and tutorials about learning R and many other topics. Click here if you're looking to post or find an R/data-science job.
Want to share your content on R-bloggers? click here if you have a blog, or here if you don't.