Open PHACTS from R

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Nothing much going to say about it, and just to report some progress:

> library("ropenphacts")
Loading required package: rJava
Loading required package: ropenphactslibs
Loading required package: rrdf
Loading required package: rrdflibs
> mapUri(
+ server="https://beta.openphacts.org/1.3",
+ appid="secret", key="secret",
+ uri="http://identifiers.org/ensembl/ENSG00000100030"
+ )
Service: https://beta.openphacts.org/1.3/mapUri
match
[1,] "http://us-east.omim.org/entry/176948"
[2,] "http://www.ensembl.org/id/ENSG00000100030"
[3,] "http://purl.uniprot.org/ensembl/ENSG00000100030"
[4,] "http://identifiers.org/ensembl/ENSG00000100030"
[5,] "http://identifiers.org/hgnc/6871"
[6,] "http://www.genenames.org/data/hgnc_data.php?hgnc_id=6871"
[7,] "http://useast.ensembl.org/id/ENSG00000100030"
[8,] "http://omim.org/entry/176948"
[9,] "http://uswest.ensembl.org/id/ENSG00000100030"
[10,] "http://bio2rdf.org/hgnc:6871"
[11,] "http://purl.uniprot.org/mim/176948"
[12,] "http://europe.omim.org/entry/176948"
[13,] "http://identifiers.org/omim/176948"
[14,] "http://www.ncbi.nlm.nih.gov/gene/5594"
[15,] "http://identifiers.org/ncbigene/5594"
[16,] "http://ensemblgenomes.org/id/ENSG00000100030"
[17,] "http://bio2rdf.org/omim:176948"
[18,] "http://asia.ensembl.org/id/ENSG00000100030"
[19,] "http://bio2rdf.org/ensembl:ENSG00000100030"
[20,] "http://bio2rdf.org/geneid:5594"
[21,] "http://purl.uniprot.org/geneid/5594"
view raw gistfile1.txt hosted with ❤ by GitHub

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